Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014086.1 Corchorus capsularis cultivar CVL-1 contig14107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8209

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1229--1347
21
5.5
22
75
19
83
22
17
6
52
1.67
1328--1383
15
3.9
15
74
9
62
16
21
5
57
1.59
1364--1494
21
6.5
21
68
13
87
22
19
7
50
1.73
1559--1647
35
2.6
34
83
5
115
14
24
6
53
1.65
1656--1695
14
2.9
14
84
0
53
22
22
2
52
1.59
1931--2182
47
5.4
47
94
2
427
23
21
8
46
1.78
2908--3010
50
2.1
50
90
0
161
36
13
4
44
1.65
2984--3039
20
2.8
20
88
0
76
33
14
8
42
1.77
5677--5743
27
2.5
27
92
0
107
41
23
17
16
1.89

Tables:   1

The End!