Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014089.1 Corchorus capsularis cultivar CVL-1 contig14110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29695

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6834--6943
46
2.4
46
95
0
193
32
20
6
40
1.77
16626--16661
17
2.1
17
90
10
56
0
5
16
77
0.94
19036--19094
25
2.4
25
88
5
86
33
23
1
40
1.65
19104--19175
26
2.8
26
78
2
92
55
9
1
33
1.41
19223--19329
9
12.2
9
79
11
98
76
0
0
23
0.78
19281--19325
23
2.0
23
86
8
65
84
0
0
15
0.62
19225--19327
17
6.0
17
85
6
100
77
0
0
22
0.77
22598--22785
88
2.1
87
83
6
229
29
7
22
39
1.82
23745--23810
32
2.0
33
85
8
91
24
24
18
33
1.97
24228--24266
20
2.0
20
85
10
53
15
10
12
61
1.56
25556--25586
14
2.1
15
94
5
55
16
6
12
64
1.47

Tables:   1

The End!