Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014093.1 Corchorus capsularis cultivar CVL-1 contig14114, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31022

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4549--4577
6
5.0
6
91
8
51
31
0
0
68
0.89
4549--4577
11
2.5
12
94
5
51
31
0
0
68
0.89
6922--6958
19
2.0
18
89
5
56
40
5
21
32
1.76
15906--15941
19
1.9
18
88
5
54
41
5
22
30
1.76
22153--22204
25
2.1
25
88
0
77
30
19
11
38
1.87
26395--26446
25
2.1
25
92
0
86
28
21
11
38
1.88
26516--26544
2
14.5
2
100
0
58
51
0
0
48
1.00
27922--28305
63
6.4
61
83
11
476
28
14
29
27
1.95
27922--28305
123
3.2
120
87
7
545
28
14
29
27
1.95

Tables:   1

The End!