Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014101.1 Corchorus capsularis cultivar CVL-1 contig14122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31524

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4673--4707
17
2.0
17
88
5
52
17
0
0
82
0.66
5792--5885
33
2.8
33
80
0
80
10
29
35
24
1.89
15978--16003
2
13.0
2
100
0
52
0
0
50
50
1.00
20758--20792
16
2.2
16
94
0
61
20
60
17
2
1.49
21593--21660
16
4.3
16
87
9
104
39
41
14
4
1.66
21561--21651
32
2.9
33
87
7
129
36
42
17
3
1.66
21543--21636
6
15.5
6
76
14
95
35
43
18
3
1.66
23648--23695
21
2.3
20
76
13
53
62
16
10
10
1.53
24626--24670
23
2.0
23
90
0
72
51
6
6
35
1.55
28725--28822
35
2.8
35
87
0
151
25
20
16
37
1.93
30099--30201
54
1.9
54
95
0
188
34
14
22
28
1.93
30252--30408
33
4.7
33
91
2
224
27
21
20
30
1.98
30446--30518
33
2.2
33
90
2
112
47
4
28
19
1.67
30685--30736
17
3.1
17
88
5
70
55
3
28
11
1.53
31397--31429
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!