Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014102.1 Corchorus capsularis cultivar CVL-1 contig14123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52621

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2592--2636
23
2.0
23
86
8
65
22
13
11
53
1.71
9947--10349
22
18.4
22
71
12
235
38
10
15
36
1.81
9917--10353
44
10.0
43
72
13
265
38
10
15
35
1.81
9947--10305
131
2.7
128
77
14
333
38
10
15
36
1.81
10783--10881
22
4.6
22
70
12
71
36
7
15
41
1.74
10958--11018
22
2.8
22
79
18
65
44
8
6
40
1.60
11475--11516
10
4.2
10
80
19
52
76
4
0
19
0.96
15854--15936
42
2.0
42
83
4
105
30
27
28
13
1.94
21233--21266
8
4.1
8
85
7
50
58
14
2
23
1.50
22846--22954
33
3.3
33
88
2
148
26
9
19
44
1.80
37435--37541
51
2.1
51
89
0
169
21
28
18
31
1.97
38768--38840
18
4.1
18
81
0
83
12
21
41
24
1.88
38768--38840
36
2.0
36
86
0
101
12
21
41
24
1.88
42150--42181
16
2.0
16
93
0
55
0
15
37
46
1.46
43438--43512
16
4.8
16
78
3
89
8
13
38
40
1.74
43438--43512
31
2.4
32
86
2
98
8
13
38
40
1.74

Tables:   1

The End!