Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014106.1 Corchorus capsularis cultivar CVL-1 contig14127, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22740

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3104--3486
37
10.4
37
94
0
642
44
7
20
27
1.77
3486--3665
41
4.4
41
91
2
263
47
12
18
21
1.81
3672--3775
36
2.9
36
77
9
88
49
16
9
25
1.76
3803--4170
37
10.1
37
87
3
523
41
7
26
25
1.81
3848--3908
19
3.3
19
65
21
56
49
3
26
21
1.65
3922--3982
19
3.3
19
68
13
54
45
1
27
24
1.62
3978--4036
18
3.2
18
65
21
50
40
10
27
22
1.85
4150--4291
37
3.9
37
84
4
141
36
11
23
28
1.89
4163--4303
36
3.9
36
81
8
162
38
11
22
27
1.88
9928--9980
15
3.9
15
72
27
64
20
0
33
45
1.52
9931--9978
24
2.0
24
100
0
96
20
0
37
41
1.53
10015--10060
21
2.2
21
92
0
74
13
21
34
30
1.91
10112--10168
28
2.0
28
100
0
114
24
14
17
43
1.86
11648--11733
41
2.1
40
95
2
154
23
6
24
45
1.77
17448--17497
14
4.0
13
75
17
52
0
8
16
76
1.02
18729--18762
1
34.0
1
100
0
68
100
0
0
0
0.00
21854--21893
14
2.7
15
84
7
64
30
12
7
50
1.68

Tables:   1

The End!