Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014109.1 Corchorus capsularis cultivar CVL-1 contig14130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13681

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3077--3112
11
3.3
11
92
0
63
41
2
8
47
1.48
3450--3479
2
15.0
2
100
0
60
50
0
0
50
1.00
3592--4190
22
27.6
22
71
10
290
35
15
9
39
1.80
3722--3807
45
1.9
45
83
4
111
38
13
11
36
1.82
3722--4692
44
22.5
43
68
16
254
34
16
9
38
1.81
4012--4190
87
2.1
86
82
5
209
32
15
10
41
1.80
4137--4199
22
3.1
20
86
6
74
34
15
9
39
1.80
4270--4442
22
7.9
21
71
8
73
34
14
9
41
1.79
4426--4525
21
4.5
22
71
13
71
35
16
7
42
1.75
4426--4490
25
2.8
23
81
11
80
38
15
6
40
1.72
4297--4862
22
25.8
21
67
15
129
34
17
9
37
1.83
4724--4865
68
2.1
66
81
5
160
38
20
9
31
1.84
5029--5066
19
2.0
20
85
15
53
63
2
5
28
1.30
6757--6816
30
2.0
30
86
0
84
33
20
5
41
1.74
9035--9085
25
2.0
25
92
0
84
19
19
19
41
1.91

Tables:   1

The End!