Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014114.1 Corchorus capsularis cultivar CVL-1 contig14135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16973

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--704
13
3.5
13
81
3
56
22
11
11
55
1.66
931--1536
36
16.6
36
81
8
658
43
8
21
26
1.81
934--1451
260
2.0
261
93
1
878
43
8
20
27
1.81
1573--1634
19
3.2
19
68
20
56
54
4
14
25
1.60
1572--1653
35
2.2
36
89
8
121
54
4
14
25
1.60
1595--1650
16
3.3
16
68
22
51
57
5
12
25
1.56
7072--7101
15
2.0
15
93
0
51
26
23
13
36
1.92
9733--9785
24
2.2
24
93
0
88
43
18
16
20
1.88
15796--15963
25
6.7
25
94
1
273
20
29
25
24
1.99
16038--16108
32
2.2
31
80
11
81
23
18
28
29
1.98
16833--16895
32
1.9
33
81
9
76
38
7
4
49
1.53

Tables:   1

The End!