Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014123.1 Corchorus capsularis cultivar CVL-1 contig14144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46567

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9322--9361
19
2.2
19
90
4
64
32
20
2
45
1.64
9312--9372
30
2.0
30
84
6
79
34
18
3
44
1.66
18889--18922
10
3.0
12
83
16
54
5
26
41
26
1.78
20785--20874
33
2.7
33
82
0
117
36
22
8
32
1.85
25689--25761
29
2.4
29
80
17
87
31
16
24
27
1.96
26536--26618
22
3.8
21
76
17
73
59
1
1
38
1.13
26538--26586
25
2.0
25
84
8
64
59
0
0
40
0.98
31163--31201
20
1.9
20
84
5
51
25
20
0
53
1.45
32181--32221
20
2.0
20
100
0
82
24
14
17
43
1.86
32702--32735
16
2.2
16
89
5
52
29
2
8
58
1.43
41237--41272
19
1.9
18
88
5
54
41
2
22
33
1.68
42555--42588
16
2.2
16
89
5
52
32
2
5
58
1.37

Tables:   1

The End!