Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014127.1 Corchorus capsularis cultivar CVL-1 contig14148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27224

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781--809
13
2.2
13
100
0
58
44
20
0
34
1.52
1091--1138
13
3.7
12
81
15
51
20
0
2
77
0.88
1093--1167
24
2.8
26
76
17
73
18
0
6
74
1.03
1092--1138
14
3.5
13
83
13
51
19
0
2
78
0.85
1450--1489
16
2.7
15
88
7
55
37
5
7
50
1.53
1450--1484
16
2.2
16
94
0
61
31
5
5
57
1.46
7225--7274
6
8.7
6
86
8
77
32
2
32
34
1.69
21035--21070
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!