Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014130.1 Corchorus capsularis cultivar CVL-1 contig14151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48671

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3404--3436
15
2.2
15
100
0
66
27
18
6
48
1.71
6338--6408
30
2.3
31
87
4
108
52
7
18
22
1.69
6399--6508
22
5.0
22
79
11
127
58
3
18
20
1.54
6486--6630
33
4.3
33
86
6
157
53
2
25
18
1.55
6563--6657
27
3.3
27
77
16
100
55
1
22
21
1.49
6497--6628
67
2.0
66
83
1
165
52
2
26
18
1.58
6593--6657
26
2.4
27
87
2
87
55
1
21
21
1.52
9566--9615
20
2.5
21
78
15
61
50
18
16
16
1.79
12651--12829
88
2.0
87
92
1
295
22
11
22
43
1.85
12843--13152
153
2.0
153
98
0
593
30
16
21
31
1.95
20277--20354
38
2.1
37
92
2
129
25
15
12
46
1.81
22165--22198
17
2.0
17
100
0
68
17
11
23
47
1.81
24492--24526
17
2.0
18
94
5
63
62
0
20
17
1.32
27065--27149
41
2.1
41
86
8
120
54
17
11
16
1.71

Tables:   1

The End!