Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014134.1 Corchorus capsularis cultivar CVL-1 contig14155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11928

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
972--1650
49
13.9
48
81
7
588
22
28
16
32
1.96
972--1646
146
4.6
146
79
5
589
22
28
16
32
1.96
5673--5724
14
3.6
15
77
17
56
42
7
15
34
1.75
7311--7393
37
2.3
37
76
17
93
32
27
16
22
1.96
7534--7606
38
1.9
38
97
0
137
38
17
16
27
1.91
7618--7817
73
2.7
74
85
3
287
30
20
18
31
1.96
7632--7820
38
5.1
37
81
6
213
29
20
19
30
1.97
7851--7902
8
6.4
8
76
12
52
34
21
0
44
1.52
7850--7895
15
2.8
17
78
15
53
34
21
0
43
1.53
7924--8070
47
3.1
46
85
5
195
21
29
17
31
1.96
8138--8473
33
10.3
33
62
20
127
28
26
12
33
1.92
8364--8459
27
3.3
27
67
25
79
29
27
7
36
1.84
8307--8499
60
3.2
60
93
0
314
27
26
10
34
1.90
8889--8943
27
2.0
27
89
0
83
20
14
25
40
1.90

Tables:   1

The End!