Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014137.1 Corchorus capsularis cultivar CVL-1 contig14158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5309

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
240--289
19
2.8
19
73
8
52
18
8
6
68
1.36
1020--1058
6
6.5
6
100
0
78
53
15
0
30
1.42
1055--1099
13
3.5
13
87
3
65
55
6
13
24
1.62
1055--1107
25
2.1
25
86
6
72
58
7
11
22
1.57
2881--2905
13
1.9
13
100
0
50
56
24
12
8
1.62
4714--4746
6
5.5
6
96
0
57
54
12
0
33
1.37
4743--4787
13
3.5
13
84
3
65
55
6
13
24
1.62
4743--4795
25
2.1
25
86
6
72
58
7
11
22
1.57

Tables:   1

The End!