Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014139.1 Corchorus capsularis cultivar CVL-1 contig14160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19584

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10157--10194
19
2.1
18
90
5
58
47
2
21
28
1.64
10146--10206
30
2.0
30
84
6
79
45
3
18
32
1.65
12819--12853
5
6.8
5
87
6
52
40
0
2
57
1.14
12819--12853
16
2.2
16
90
5
54
40
0
2
57
1.14
13200--13232
15
2.1
17
88
11
52
39
30
15
15
1.88
15026--15069
20
2.4
19
82
17
58
6
18
0
75
1.02
15469--15509
22
2.0
20
85
9
55
21
2
0
75
0.92
19221--19397
50
3.5
50
95
0
309
22
13
32
31
1.93

Tables:   1

The End!