Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014143.1 Corchorus capsularis cultivar CVL-1 contig14164, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4635

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--592
18
2.1
19
85
9
53
71
13
15
0
1.16
1645--1713
28
2.6
26
80
15
70
15
27
1
55
1.50
1774--1863
35
2.6
35
75
10
94
22
26
5
45
1.74
1910--1988
14
5.6
14
76
8
81
18
21
5
54
1.63
1900--1988
28
3.2
27
81
12
99
17
21
5
55
1.63
1983--2080
26
3.6
25
75
20
97
26
17
4
52
1.62
2010--2090
32
2.5
33
84
13
121
24
18
3
53
1.61
2128--2206
40
2.0
39
85
11
108
20
24
3
51
1.63
2151--2196
24
1.9
24
82
8
58
19
21
2
56
1.52
2404--2478
38
1.9
40
83
5
100
24
24
4
48
1.68
2389--2486
40
2.5
39
77
8
110
24
22
5
47
1.71

Tables:   1

The End!