Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014149.1 Corchorus capsularis cultivar CVL-1 contig14170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27368

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2968--3029
29
2.1
30
84
3
81
38
16
4
40
1.69
11190--11662
161
3.0
161
95
1
817
25
12
17
44
1.84
15898--15924
2
13.5
2
100
0
54
48
0
0
51
1.00
16254--16291
2
19.0
2
100
0
76
50
0
0
50
1.00
20093--20122
2
15.0
2
100
0
60
50
0
0
50
1.00
26802--26907
53
2.0
53
100
0
212
33
13
9
43
1.76
27134--27177
21
2.1
21
83
8
54
18
31
9
40
1.81
27234--27350
32
3.6
32
94
1
180
15
42
29
12
1.84

Tables:   1

The End!