Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014167.1 Corchorus capsularis cultivar CVL-1 contig14188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20918

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1435--1468
8
4.1
8
92
7
59
23
0
14
61
1.33
1435--1468
17
2.1
16
94
5
59
23
0
14
61
1.33
2376--2481
33
3.2
33
84
5
135
9
27
40
22
1.85
6454--6534
29
2.7
29
86
3
108
24
23
13
38
1.91
7226--7282
29
2.0
28
96
3
105
42
17
17
22
1.89
10827--10858
16
1.9
17
93
6
57
50
0
0
50
1.00
11565--11596
16
1.9
17
93
6
57
50
0
0
50
1.00
14596--14691
45
2.2
44
85
10
126
39
20
5
34
1.75
15177--15580
204
2.0
204
91
0
655
41
17
18
23
1.90
15916--15945
2
15.0
2
100
0
60
50
0
0
50
1.00
16139--16180
19
2.3
18
88
11
68
54
11
0
33
1.37

Tables:   1

The End!