Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014170.1 Corchorus capsularis cultivar CVL-1 contig14191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22213

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1158--1224
31
2.2
31
88
0
107
47
4
16
31
1.66
4321--4427
56
1.9
54
88
3
160
44
14
9
31
1.76
7744--8259
54
9.4
56
88
4
582
49
6
18
25
1.73
7744--8259
55
9.4
55
93
1
779
49
6
18
25
1.73
7744--8259
109
4.7
110
91
1
779
49
6
18
25
1.73
8120--8212
29
3.4
28
64
21
70
48
7
21
22
1.75
8165--8245
25
3.1
25
67
19
74
48
7
22
22
1.75
10173--10205
15
2.2
15
94
0
57
60
9
24
6
1.49
11111--11310
43
4.5
43
74
14
188
55
6
18
20
1.64
11151--11326
21
7.9
21
70
18
106
56
5
18
19
1.61
11190--11245
15
3.9
15
74
9
62
57
5
21
16
1.59
14817--14928
33
3.4
33
94
0
188
9
23
42
24
1.84
16743--16850
33
3.3
33
83
5
146
43
18
9
28
1.81
16876--16939
33
1.9
33
83
0
83
40
18
14
26
1.89
19484--19595
33
3.4
33
93
0
179
10
23
41
24
1.85
22000--22065
31
2.1
31
88
5
98
27
19
4
48
1.68

Tables:   1

The End!