Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014171.1 Corchorus capsularis cultivar CVL-1 contig14192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34412

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
581--637
29
2.0
29
96
0
105
33
12
14
40
1.83
1225--1291
33
2.0
33
88
5
98
52
2
0
44
1.16
1203--1358
79
2.0
79
94
2
278
48
2
0
48
1.15
1260--1345
22
3.8
22
68
8
57
48
2
0
48
1.14
2846--2876
2
15.5
2
93
0
53
48
0
3
48
1.17
14136--14164
13
2.1
14
93
6
51
79
0
20
0
0.74
28714--28745
15
2.2
15
94
5
57
71
3
0
25
1.00
33642--33718
33
2.3
32
82
6
91
24
40
25
9
1.85

Tables:   1

The End!