Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014174.1 Corchorus capsularis cultivar CVL-1 contig14195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19514

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2637--2902
51
5.3
51
64
21
168
29
24
19
26
1.98
2080--3069
99
10.0
99
92
0
1513
27
22
21
27
1.99
3487--4270
231
3.4
231
96
1
1446
25
24
17
31
1.97
5628--5880
99
2.5
99
92
0
425
20
26
16
35
1.94
5826--5954
66
2.0
65
86
4
179
17
25
18
38
1.92
5628--6210
264
2.2
264
96
1
1089
20
26
16
36
1.94
5891--6144
99
2.6
99
91
1
402
21
26
16
35
1.94
6090--6350
66
4.0
66
94
1
445
17
26
17
38
1.92
6549--6672
43
2.9
43
87
2
178
14
28
15
41
1.86
10814--10843
13
2.3
13
94
0
51
10
10
20
60
1.57
14852--14909
2
28.5
2
78
3
62
48
0
10
41
1.37
14855--14909
14
3.9
14
90
2
74
49
0
10
40
1.38
15284--15309
13
2.0
13
100
0
52
61
0
30
7
1.24
17070--17094
1
25.0
1
100
0
50
100
0
0
0
0.00

Tables:   1

The End!