Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014175.1 Corchorus capsularis cultivar CVL-1 contig14196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9507

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
431--470
20
2.0
20
90
0
62
47
12
15
25
1.80
410--549
40
3.5
40
71
13
144
40
14
17
27
1.89
388--540
79
1.9
79
95
0
279
41
13
18
26
1.87
664--777
52
2.1
56
91
6
191
49
7
20
23
1.73
1066--1135
30
2.3
30
77
0
77
12
38
21
27
1.90
3225--3277
25
2.1
25
100
0
106
43
11
3
41
1.58
3339--3385
23
2.0
23
95
0
85
27
19
8
44
1.79

Tables:   1

The End!