Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014189.1 Corchorus capsularis cultivar CVL-1 contig14210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28437

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
731--838
33
3.3
33
86
2
146
12
28
37
22
1.90
7703--7760
21
2.8
21
94
0
98
39
20
15
24
1.91
16759--16835
38
2.0
38
97
0
145
35
18
11
35
1.87
20922--21159
118
2.0
118
98
0
458
37
20
18
23
1.94
21213--21611
30
13.2
30
94
1
638
33
18
16
31
1.93
21213--21611
149
2.6
150
93
1
647
33
18
16
31
1.93
22534--22608
38
2.0
38
94
0
132
36
16
10
37
1.83
22971--23000
15
1.9
16
93
6
53
10
43
0
46
1.37
24096--24125
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!