Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014192.1 Corchorus capsularis cultivar CVL-1 contig14213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8818

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--453
51
7.5
51
79
9
380
40
15
2
42
1.60
244--283
20
2.0
21
90
5
64
40
15
2
42
1.60
93--463
150
2.4
154
85
6
470
40
15
2
41
1.61
1791--1923
71
1.9
71
84
9
182
36
27
17
18
1.93
1922--1967
16
2.8
17
87
12
69
41
6
21
30
1.78
2018--2073
29
1.9
29
85
0
76
39
21
16
23
1.92
2052--2238
100
1.9
100
85
2
259
33
23
19
22
1.97
2276--2355
29
2.8
29
79
11
76
33
22
22
21
1.97
3360--3393
18
1.9
18
94
5
61
0
17
0
82
0.67
4181--4206
5
5.2
5
100
0
52
19
0
0
80
0.71
4474--4506
2
16.5
2
100
0
66
51
0
0
48
1.00
8437--8540
44
2.4
44
91
0
172
31
27
15
25
1.95

Tables:   1

The End!