Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014197.1 Corchorus capsularis cultivar CVL-1 contig14218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12792

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1049--1076
14
2.0
14
100
0
56
50
14
7
28
1.69
1247--1350
11
9.2
11
74
11
77
60
9
21
8
1.54
1264--1350
24
3.7
24
89
1
122
58
10
20
10
1.60
1337--1440
35
2.9
35
91
1
154
43
10
21
25
1.84
1380--1499
62
1.9
62
88
3
179
39
11
24
25
1.89
1345--1530
97
1.9
97
84
6
252
40
11
21
26
1.87
1537--1644
32
3.2
33
80
15
141
48
6
17
27
1.72
1547--1665
36
3.4
36
78
15
142
47
8
17
26
1.76
1537--1665
68
1.9
68
85
9
183
48
7
17
27
1.74

Tables:   1

The End!