Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014199.1 Corchorus capsularis cultivar CVL-1 contig14220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25864

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4215--4317
40
2.7
38
93
3
170
43
8
19
28
1.80
5735--5784
26
1.9
26
84
8
66
18
20
10
52
1.73
6713--6819
33
3.2
33
82
2
126
7
28
40
23
1.82
11692--11726
10
3.7
9
88
11
52
17
0
0
82
0.66
11799--11832
17
2.0
17
88
0
50
23
5
17
52
1.66
12789--12895
33
3.2
33
82
2
108
8
29
40
21
1.83
13911--14505
299
2.0
299
97
0
1118
27
25
15
31
1.96
17173--17206
17
2.1
16
88
5
50
79
0
11
8
0.94
20184--20370
41
4.6
40
82
9
227
36
19
28
14
1.91
20184--20370
78
2.3
82
84
7
258
36
19
28
14
1.91
24448--24527
33
2.4
33
87
0
106
23
40
28
7
1.82
24479--24554
33
2.3
32
82
10
91
22
42
26
9
1.83
25517--25550
17
2.0
17
94
0
59
55
14
5
23
1.61
25624--25657
9
3.7
9
88
4
50
82
0
0
17
0.67

Tables:   1

The End!