Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014203.1 Corchorus capsularis cultivar CVL-1 contig14224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20231

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--758
16
1.9
16
93
0
53
54
0
9
35
1.33
3384--3417
17
2.0
17
88
0
50
44
2
2
50
1.32
6627--6682
24
2.3
24
87
0
76
3
26
12
57
1.52
14420--14455
19
1.9
18
88
5
54
41
2
22
33
1.68
15052--15087
18
2.1
17
94
5
63
11
16
8
63
1.49
17713--17743
16
1.9
16
93
0
53
16
6
22
54
1.64
17827--17865
21
1.9
19
85
10
51
25
10
20
43
1.83
19441--19476
19
1.9
18
88
5
54
41
2
22
33
1.68
19596--19620
10
2.5
10
100
0
50
40
24
8
28
1.83
20083--20118
18
2.1
17
94
5
63
11
16
8
63
1.49

Tables:   1

The End!