Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014208.1 Corchorus capsularis cultivar CVL-1 contig14229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16675

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
161--221
30
2.0
30
90
6
97
34
16
27
21
1.95
2774--2852
33
2.4
33
82
0
113
26
8
18
45
1.79
2904--3010
33
3.2
33
97
0
205
26
12
16
44
1.83
3320--3380
30
2.0
30
87
6
88
34
14
27
22
1.94
3424--3461
19
2.1
18
85
14
51
39
10
34
15
1.82
4717--4760
20
2.1
22
87
8
65
25
6
4
63
1.38
4728--4767
20
2.0
20
85
0
53
17
7
10
65
1.46
15913--15995
35
2.4
35
93
0
139
26
15
20
37
1.93
16524--16562
6
6.5
6
100
0
78
53
15
0
30
1.42
16559--16595
12
3.0
12
84
7
56
54
8
13
24
1.66
16559--16605
13
3.7
13
85
2
60
57
10
12
19
1.64
16559--16611
25
2.1
25
86
6
72
58
11
11
18
1.62

Tables:   1

The End!