Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014210.1 Corchorus capsularis cultivar CVL-1 contig14231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21340

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1135--1208
28
2.6
28
72
17
73
67
4
12
16
1.36
2845--2883
21
1.9
21
89
5
62
5
28
33
33
1.79
7102--7160
30
2.0
30
86
0
82
16
25
23
33
1.96
8092--8136
20
2.2
20
84
4
54
66
8
8
15
1.43
9463--9521
19
2.9
21
73
21
61
38
18
1
40
1.61
9463--9522
11
5.7
11
80
13
65
40
18
1
40
1.60
14828--14870
20
2.0
20
86
8
59
25
20
4
48
1.69
16509--16549
11
3.7
11
87
9
57
41
17
2
39
1.62

Tables:   1

The End!