Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014219.1 Corchorus capsularis cultivar CVL-1 contig14240, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7900

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2874--2934
31
2.0
31
90
6
97
31
21
4
42
1.74
3683--3792
22
5.0
22
82
7
134
35
10
18
36
1.84
3886--3942
24
2.5
22
80
8
69
38
8
17
35
1.81
4096--4136
21
1.9
21
95
5
73
48
7
9
34
1.64
4036--4262
22
10.4
23
71
14
119
42
10
14
33
1.79
4096--4284
22
8.8
22
74
6
102
44
9
12
33
1.75
4368--4440
19
3.6
20
81
7
85
45
10
15
28
1.80
4406--4966
22
25.7
22
70
12
194
39
10
14
35
1.81
4406--4966
44
12.8
44
69
14
236
39
10
14
35
1.81
4575--4659
23
3.7
23
84
1
100
42
5
14
37
1.69
7065--7368
22
13.9
22
70
7
136
33
17
10
38
1.84
7029--7369
44
7.8
44
70
11
177
32
17
10
39
1.84
7404--7481
22
3.5
22
77
6
77
37
19
7
35
1.80
7445--7493
22
2.2
22
85
0
62
44
14
8
32
1.74
7614--7648
18
1.9
18
88
11
54
31
14
28
25
1.95

Tables:   1

The End!