Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014225.1 Corchorus capsularis cultivar CVL-1 contig14246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11143

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
623--655
5
6.6
5
100
0
66
36
0
0
63
0.95
3808--3832
12
2.1
12
100
0
50
36
16
16
32
1.90
5410--5444
11
3.2
11
83
0
52
77
17
5
0
0.96
5473--5508
9
4.1
9
85
7
56
0
0
11
88
0.50
5480--5514
11
3.2
11
91
0
52
0
2
11
85
0.69
5472--5508
16
2.2
17
90
4
58
0
0
13
86
0.57
5473--5514
20
2.0
22
90
9
70
0
2
11
85
0.68
6056--6084
2
14.5
2
100
0
58
48
51
0
0
1.00
6827--6867
2
20.5
2
100
0
82
51
0
0
48
1.00
7411--7462
26
2.0
26
100
0
104
50
3
7
38
1.50
8457--8497
3
13.7
3
100
0
82
65
0
0
34
0.93
9370--9412
12
3.5
12
90
6
68
34
13
23
27
1.93

Tables:   1

The End!