Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014227.1 Corchorus capsularis cultivar CVL-1 contig14248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26976

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--35
2
16.0
2
100
0
64
50
0
0
50
1.00
849--898
22
2.3
22
89
3
75
42
18
22
18
1.90
1295--1344
26
1.9
26
100
0
100
26
42
8
24
1.82
3528--3611
13
6.1
13
67
17
53
42
14
14
28
1.84
3671--3724
22
2.4
23
90
3
83
48
12
27
11
1.76
4448--4491
12
3.4
12
87
9
52
11
40
0
47
1.39
10557--10712
74
2.1
73
91
3
251
21
29
8
39
1.84
14935--15007
32
2.3
31
83
6
92
47
6
21
23
1.74
15074--15133
29
2.0
30
87
3
86
63
3
23
10
1.40
15138--15349
111
1.9
111
93
0
361
53
6
24
15
1.66
15245--15315
36
1.9
38
88
5
110
60
4
21
14
1.50
15313--15452
44
3.0
45
68
25
128
55
5
21
17
1.61
15139--15375
111
2.1
111
87
3
334
54
6
23
15
1.64
15232--15520
95
3.0
94
89
6
418
56
6
21
16
1.62
15431--15495
21
3.1
21
78
6
69
60
6
21
12
1.54
15424--15510
36
2.4
36
86
5
113
59
6
19
13
1.56
15572--15640
20
3.3
20
78
6
75
57
4
15
21
1.55
15630--15705
32
2.3
33
88
6
111
55
6
17
21
1.64
15678--15739
26
2.4
26
89
7
99
53
3
16
27
1.58
15724--15768
22
2.0
22
100
0
90
55
4
17
22
1.60
15726--15842
42
3.1
36
84
10
137
52
5
18
23
1.66
15763--15863
21
4.9
21
82
3
125
49
4
22
22
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19867--19908
18
2.3
18
84
12
50
45
9
9
35
1.69
21255--21381
31
4.2
31
63
18
77
37
4
39
18
1.71
21208--21382
91
1.9
91
96
0
323
38
5
36
18
1.75
22434--22473
21
1.9
21
85
10
55
30
17
2
50
1.59
23706--23800
44
2.1
44
84
7
120
33
32
12
21
1.91

Tables:   1

The End!