Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014229.1 Corchorus capsularis cultivar CVL-1 contig14250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28019

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
837--893
15
3.6
15
75
17
53
40
36
15
7
1.75
3744--3829
46
1.9
46
88
4
131
34
18
18
27
1.95
4291--4332
16
2.5
17
76
3
50
14
19
21
45
1.85
8513--9066
35
15.9
35
89
4
795
39
10
18
31
1.84
12653--12682
14
2.1
14
93
0
51
46
10
10
33
1.71
12780--12916
62
2.2
62
96
1
247
18
23
10
47
1.79
15288--15312
2
12.5
2
100
0
50
52
0
0
48
1.00
18923--18973
18
2.6
19
84
12
68
43
0
0
56
0.99
18920--18973
15
3.7
15
80
11
67
42
0
0
57
0.98
23487--23928
221
2.0
221
91
2
721
46
10
16
26
1.79
26367--26590
91
2.5
91
90
2
344
35
12
20
30
1.91

Tables:   1

The End!