Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014231.1 Corchorus capsularis cultivar CVL-1 contig14252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23743

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
904--942
20
2.0
20
85
10
53
0
12
5
82
0.83
2066--2133
31
2.2
31
89
5
102
35
16
8
39
1.79
2958--3004
24
1.9
25
95
4
87
27
10
10
51
1.70
3025--3088
27
2.3
27
86
2
83
53
7
29
9
1.61
5878--6058
78
2.3
78
82
1
211
25
18
23
32
1.97
7870--8678
403
2.0
402
99
0
1582
38
15
16
29
1.89
21470--21518
17
3.1
17
77
14
59
16
26
4
53
1.61

Tables:   1

The End!