Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014232.1 Corchorus capsularis cultivar CVL-1 contig14253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13114

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--167
2
18.0
2
94
5
65
48
2
0
48
1.15
864--923
22
2.8
21
77
10
68
26
25
28
20
1.99
866--921
20
2.7
21
78
13
62
26
26
28
17
1.98
3288--3332
24
2.0
23
86
8
65
22
13
8
55
1.65
5047--5104
18
3.1
18
69
13
53
39
6
13
39
1.72
5945--6100
78
2.0
78
83
2
197
30
18
26
24
1.98

Tables:   1

The End!