Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014236.1 Corchorus capsularis cultivar CVL-1 contig14257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22419

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1901--1934
15
2.2
16
89
5
52
17
11
8
61
1.54
12051--12093
20
2.2
20
100
0
86
30
9
13
46
1.75
16219--16416
68
2.9
68
98
0
378
40
15
11
32
1.83
16474--16500
2
13.5
2
100
0
54
48
0
0
51
1.00
18103--18145
20
2.2
20
87
8
61
16
23
16
44
1.86
18204--18439
105
2.3
105
87
0
330
33
16
19
30
1.94
18204--18467
105
2.5
105
85
1
305
33
17
17
31
1.93
18991--19036
22
2.1
22
95
0
83
54
13
2
30
1.50

Tables:   1

The End!