Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014237.1 Corchorus capsularis cultivar CVL-1 contig14258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15527

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1073--1115
20
2.2
20
86
0
59
13
23
18
44
1.86
1174--1408
104
2.3
104
87
1
337
33
17
18
30
1.94
1174--1436
104
2.5
105
85
1
296
33
17
17
31
1.94
7270--7297
12
2.3
12
100
0
56
0
17
32
50
1.47
8522--8575
15
3.6
15
94
0
90
55
7
5
31
1.51
12288--12344
29
2.0
28
86
10
80
43
14
21
21
1.87
12296--12364
31
2.3
28
81
16
77
44
13
23
18
1.84
14630--14674
19
2.3
20
85
11
58
31
4
6
57
1.44
15319--15353
17
2.1
17
94
0
61
34
22
31
11
1.90

Tables:   1

The End!