Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014247.1 Corchorus capsularis cultivar CVL-1 contig14268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42048

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1683--1783
42
2.4
42
86
0
139
22
39
27
9
1.86
6628--6654
6
4.5
6
100
0
54
85
0
0
14
0.61
6786--6916
62
2.1
61
79
8
140
48
16
13
22
1.81
9316--9353
18
2.1
18
100
0
76
44
23
10
21
1.83
21166--21217
22
2.4
22
83
6
61
25
3
7
63
1.38
25714--25779
22
3.0
22
93
2
114
13
9
3
74
1.18
25719--25774
11
5.1
11
71
16
53
14
8
1
75
1.13
25714--25776
12
5.5
12
80
16
80
14
9
1
74
1.13
25726--25785
12
5.5
11
81
13
61
11
10
3
75
1.17
25714--25790
22
3.5
21
87
5
100
11
9
3
75
1.17
25761--25802
17
2.5
17
84
7
50
9
9
7
73
1.24
31870--31918
26
1.9
25
83
4
62
48
12
20
18
1.79

Tables:   1

The End!