Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014249.1 Corchorus capsularis cultivar CVL-1 contig14270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28550

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1515--1553
20
2.0
20
85
9
55
30
25
17
25
1.97
2024--2063
14
2.8
14
92
3
62
65
5
7
22
1.38
2428--2475
17
2.8
17
87
0
60
33
18
22
25
1.97
6519--6544
1
26.0
1
100
0
52
0
0
0
100
0.00
12629--12778
77
1.9
77
95
0
273
44
13
6
36
1.70
13818--13860
16
2.7
16
96
0
77
37
41
13
6
1.72
13818--13876
16
3.8
16
82
10
61
35
42
16
5
1.71
14642--14702
16
3.8
16
86
0
95
45
34
13
6
1.69
23117--23168
3
17.7
3
80
4
61
0
32
3
63
1.12
24511--24561
18
2.8
18
87
3
66
41
0
3
54
1.19
25289--25354
31
2.1
31
94
0
114
31
7
18
42
1.78

Tables:   1

The End!