Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014253.1 Corchorus capsularis cultivar CVL-1 contig14274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21752

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1800--1873
21
3.5
21
88
3
96
14
25
10
48
1.77
4796--4833
18
2.1
18
85
9
51
63
7
5
23
1.42
9103--9210
56
1.9
56
96
0
198
31
12
25
30
1.92
13564--13622
29
2.0
29
96
0
109
6
25
23
44
1.78
15436--15527
48
1.9
48
100
0
184
39
28
10
21
1.87
16824--17027
41
4.9
41
78
7
187
40
25
10
23
1.87
16843--17028
84
2.2
85
87
2
268
40
24
10
23
1.86

Tables:   1

The End!