Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014258.1 Corchorus capsularis cultivar CVL-1 contig14279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29478

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--721
168
2.0
167
85
4
447
30
13
15
40
1.86
2535--2576
21
2.0
21
86
9
59
19
0
30
50
1.48
7354--7387
14
2.4
14
85
0
50
50
20
0
29
1.49
17220--17259
14
2.8
14
84
3
53
35
0
0
65
0.93
17220--17259
15
2.7
15
84
7
55
35
0
0
65
0.93
24158--24205
22
2.2
22
88
0
69
4
12
18
64
1.43
28952--28985
14
2.4
14
85
0
50
20
0
38
41
1.53

Tables:   1

The End!