Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014265.1 Corchorus capsularis cultivar CVL-1 contig14286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23206

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2166--2232
28
2.4
28
94
0
116
44
13
14
26
1.83
2654--2680
13
2.1
13
100
0
54
55
22
0
22
1.44
2819--2847
12
2.4
12
100
0
58
6
41
0
51
1.28
9495--9533
20
2.0
20
89
0
60
30
2
12
53
1.52
9772--9821
19
2.5
20
90
9
84
34
2
18
46
1.60
11655--11679
10
2.5
10
100
0
50
48
20
8
24
1.76
12603--12629
6
4.5
6
100
0
54
29
0
14
55
1.40
14799--14836
19
2.0
19
100
0
76
21
15
36
26
1.93
16522--16580
13
4.5
13
87
10
84
45
8
15
30
1.75
16522--16580
27
2.2
26
85
11
84
45
8
15
30
1.75
17687--17721
12
2.8
12
91
4
52
82
0
14
2
0.77
19695--19855
50
3.2
50
93
0
268
37
11
27
22
1.89
19720--19803
27
3.3
27
63
19
70
34
11
30
22
1.90
22719--22757
20
2.0
20
89
0
60
30
2
12
53
1.52

Tables:   1

The End!