Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014268.1 Corchorus capsularis cultivar CVL-1 contig14289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50735

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2317--2777
35
13.2
35
92
1
703
29
14
21
34
1.93
2317--2946
105
6.0
105
88
4
694
29
15
20
34
1.94
2690--2946
35
7.3
35
90
1
356
27
19
17
35
1.94
4110--4293
87
2.1
85
82
10
230
45
5
16
32
1.71
15381--15439
28
2.2
26
77
13
66
45
13
1
38
1.54
20352--20390
11
3.7
10
86
6
51
82
0
10
7
0.86
26050--26320
87
3.2
85
85
4
366
38
28
10
23
1.87
26050--26313
41
6.2
42
77
7
237
37
28
10
23
1.88
29514--29549
19
1.9
18
88
5
54
41
2
22
33
1.68
39614--39655
18
2.3
18
95
0
75
0
47
14
38
1.44
44096--44139
19
2.3
19
92
0
70
18
20
11
50
1.77
49631--49664
11
3.2
10
84
15
50
50
17
2
29
1.61

Tables:   1

The End!