Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014270.1 Corchorus capsularis cultivar CVL-1 contig14291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16709

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1912--1965
21
2.6
21
80
11
58
37
20
22
20
1.95
3422--3446
13
1.9
13
100
0
50
32
44
0
24
1.54
10043--10121
36
2.1
38
93
4
135
32
6
15
45
1.71
11142--11181
22
1.9
21
85
10
55
37
2
5
55
1.35
15185--15211
2
13.5
2
100
0
54
48
0
0
51
1.00
15209--15242
4
8.5
4
100
0
68
26
0
0
73
0.83
15707--15736
14
2.1
15
93
6
53
86
13
0
0
0.57

Tables:   1

The End!