Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014272.1 Corchorus capsularis cultivar CVL-1 contig14293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41257

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5969--6008
20
2.1
19
86
9
55
10
12
20
57
1.63
10297--10338
2
21.5
2
85
4
59
50
4
0
45
1.23
32362--32534
67
2.6
67
93
0
294
27
10
21
40
1.86
32486--32674
104
1.9
101
82
7
240
24
12
23
39
1.89
32759--32982
91
2.5
91
89
2
335
31
19
12
35
1.90
33027--33061
16
2.2
16
100
0
70
11
25
17
45
1.81
35923--35958
2
18.0
2
88
0
54
44
0
5
50
1.25
38104--38299
31
6.5
31
68
23
116
35
18
19
26
1.95
38139--38240
29
3.4
29
72
15
109
32
19
20
27
1.97
38108--38271
60
2.7
60
92
3
269
34
18
19
27
1.95
38333--38497
31
5.5
30
69
16
126
26
18
19
35
1.95
38359--38462
29
3.5
29
72
14
95
26
19
19
34
1.95
38333--38493
60
2.7
60
92
0
250
26
18
19
36
1.95

Tables:   1

The End!