Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014273.1 Corchorus capsularis cultivar CVL-1 contig14294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16287

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164--300
31
4.4
31
83
3
168
32
26
21
18
1.97
4582--4834
35
7.1
35
81
5
265
37
16
8
37
1.79
4715--4754
21
1.9
21
94
0
71
37
12
0
50
1.41
8271--8325
28
2.0
28
96
0
101
47
16
10
25
1.79
16222--16254
17
1.9
17
100
0
66
42
6
18
33
1.75
16251--16287
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!