Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014275.1 Corchorus capsularis cultivar CVL-1 contig14296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16135

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
477--568
46
2.0
47
85
10
127
44
22
15
17
1.86
4178--4212
14
2.6
14
90
4
54
0
11
2
85
0.69
9846--9879
6
5.5
6
89
6
50
17
14
2
64
1.40
9932--9987
26
2.2
25
81
12
60
33
0
5
60
1.19
10236--10466
110
2.1
110
91
4
374
43
8
10
37
1.70
12680--12704
3
8.3
3
100
0
50
68
0
0
32
0.90
13240--13896
335
1.9
336
83
5
849
38
8
13
39
1.76
14572--14615
21
2.2
20
83
4
52
31
6
4
56
1.46
14701--14732
2
16.0
2
100
0
64
50
0
0
50
1.00
14892--14933
21
2.0
21
86
9
59
30
16
2
50
1.58

Tables:   1

The End!