Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014277.1 Corchorus capsularis cultivar CVL-1 contig14298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39815

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152--190
20
2.0
20
94
0
69
25
10
43
20
1.83
21053--21079
13
2.1
13
100
0
54
37
0
22
40
1.54
22667--22693
2
13.5
2
100
0
54
48
0
0
51
1.00
23921--23961
15
2.7
15
82
17
57
73
0
4
21
1.02
24530--24559
2
15.5
2
93
6
53
46
0
0
53
1.00
31290--31326
17
2.1
18
95
5
67
48
0
32
18
1.49
31313--31359
24
2.0
24
91
0
76
44
4
29
21
1.71
31819--31991
87
2.0
85
95
2
310
34
13
27
24
1.93
33115--33381
132
2.0
131
86
0
363
32
17
14
35
1.91
38530--38582
17
3.2
17
72
5
63
22
15
7
54
1.65
38532--38589
16
3.6
16
75
13
64
20
17
8
53
1.70
38523--38591
33
2.1
33
97
0
129
20
15
8
55
1.67

Tables:   1

The End!