Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014280.1 Corchorus capsularis cultivar CVL-1 contig14301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9181

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1929--1971
6
7.3
6
94
5
79
16
0
0
83
0.64
1930--1967
17
2.2
17
100
0
76
15
0
0
84
0.63
2369--2403
11
3.2
11
83
0
52
77
17
5
0
0.96
3225--3265
12
3.5
11
86
6
55
36
0
2
60
1.10
3217--3265
23
2.1
23
81
7
55
42
2
2
53
1.24
6160--6203
19
2.4
19
88
11
65
15
9
20
54
1.68

Tables:   1

The End!