Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014281.1 Corchorus capsularis cultivar CVL-1 contig14302, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15435

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7916--7960
21
2.1
22
84
12
58
17
35
8
37
1.81
7925--7965
21
2.0
21
85
9
57
17
36
7
39
1.77
8044--8075
15
2.2
14
94
5
55
37
18
0
43
1.51
8213--8251
14
2.8
14
92
0
69
46
5
25
23
1.73
8653--8705
21
2.6
20
82
5
61
39
7
47
5
1.56
8780--8833
27
2.0
27
100
0
108
14
18
37
29
1.91
8977--9044
12
5.4
12
72
16
57
36
1
5
55
1.33
12096--12135
9
4.4
9
83
0
53
40
10
5
45
1.60
12624--12681
28
2.2
26
81
12
64
56
1
3
37
1.26
14987--15023
15
2.5
15
80
20
51
48
0
0
51
1.00
14990--15057
20
3.3
20
79
4
73
57
0
0
42
0.98

Tables:   1

The End!