Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014287.1 Corchorus capsularis cultivar CVL-1 contig14308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19493

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
94
0
67
47
0
2
50
1.15
2909--2968
17
3.7
16
78
8
59
48
1
5
45
1.34
2912--2960
23
2.1
23
84
0
62
48
2
2
46
1.25
3003--3076
22
3.5
22
70
17
68
55
5
0
39
1.23
3013--3045
14
2.3
15
89
5
50
51
6
0
42
1.26
2998--3077
44
1.9
40
87
10
115
53
5
0
41
1.22
4562--4659
48
2.0
48
98
0
187
34
11
20
33
1.88
6056--6091
3
12.0
3
100
0
72
66
0
0
33
0.92
7943--8036
46
2.0
47
91
2
154
21
25
20
32
1.97
16609--16642
15
2.3
15
100
0
68
29
5
32
32
1.81

Tables:   1

The End!